-Press Release Number: PR-IOWASTATE-09-1-6I
-Source: Iowa State University
-Date issued: January 12, 2009
-Contact: Gaya Amarasinghe, +1 515-294-3216, amarasin@iastate.edu; Dan Kuester, +1 515-294-0704, kuester@iastate.edu
Iowa State University researchers discover structure of key Ebola protein
AMES, Iowa -- Research led by Iowa State University scientists has them a step closer to finding a way to counter the Ebola virus.
A team led by Gaya Amarasinghe, an assistant professor in biochemistry, biophysics and molecular biology, has recently solved the structure from a key part of the Ebola protein known as VP35.
VP35 interferes with the natural resistance of host cells against viral infections.
"Usually when viruses infect cells, the host immune system can fight to eventually clear the virus. But with Ebola infections, the ability of the host to mount a defense against the invading virus is lost," said Amarasinghe.
This is because the VP35 protein interferes with the host's innate immune pathways that form the first line of defense against pathogens, he said.
In their research directed toward understanding host-viral interactions, Amarasinghe and his research team used a combination of X-ray crystallography and nucleic magnetic resonance spectroscopy to solve the structure using non-infectious protein samples.
A report describing the findings is published this week in the journal Proceedings of the National Academy of Sciences of the United States of America.
Now that the structure from a key part of VP35 is available, this information can be used as a template for anti-viral drug discovery.
"The next step is to use this structure to identify and design drugs that potentially bind with VP35," he said.
If a drug that inhibits VP35 function can be discovered, then the Ebola virus could potentially be neutralized.
"Without functional VP35, the Ebola virus cannot replicate so it is noninfectious," said Amarasinghe.
The Ebola virus can cause hemorrhagic fever that is usually fatal. According to the Center for Disease Control and Prevention, outbreaks have caused more than 1,000 deaths, mostly in Central Africa, since it was first recognized in 1976.
Amarasinghe co-authored this study with Daisy Leung, assistant scientist; Nathaniel Ginder, graduate student; Bruce Fulton, associate scientist; and Richard Honzatko, professor; all from Iowa State's biochemistry, biophysics and molecular biology department, together with Christopher Basler, associate professor from Mount Sinai School of Medicine in New York City and Jay Nix from the Berkeley National Laboratory in Berkeley, Calif.
Work in the Amarasinghe laboratory was funded in part by the Roy J. Carver Charitable Trust.
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The original news release can be found at: http://www.public.iastate.edu/~nscentral/news/2009/jan/ebola.shtml
[Note: Published in Proceedings of the National Academy of Sciences of the United States of America, PNAS published online before print January 2, 2009, doi:10.1073/pnas.0807854106; Daisy W. Leung, Nathaniel D. Ginder, D. Bruce Fulton, Jay Nix, Christopher F. Basler, Richard B. Honzatko, and Gaya K. Amarasinghe; "Structure of the Ebola VP35 interferon inhibitory domain".
Diffraction data were collected at the Advanced Light Source (Lawrence Berkeley National Laboratory), beamline 4.2.2. Lawrence Berkeley National Laboratory is funded by the U.S. Department of Energy's Office of Science.
The contents of all materials on lightsources.org are the sole responsibility of the authors of the materials and/or the facilities or institutions under whose auspices the materials were produced. -lightsources.org]
Tags: ALS - Advanced Light Source Medical and Life Sciences
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